Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQHPAEHSPLGKTSEYVSSYTPSLLFPISRTAKWAELGLSAETLPYRGVDIWNCYELSWLTPAGKPVVAIGEFSIPADSPNIIESKSFKLYLNSLNQSAFDSREALRAVLQKDLSAAVGAPVGVRLRSLDEVAEEGIGRLPGRCIDELDIAVDGYEQPRPELLRCDAGRIVEEQLYSHLLKSNCPVTGQPDWGTLVVDYRGPALDPASLLAYLVSFRQHQDFHEQCVERIFLDLQRLLQPQALSVYARYVRRGGLDINPYRSLAEVAPD-NRRLVRQ
3RZP Chain:A ((32-290))
-----------------NQYDPSLLQPVPRSLNRNDLHLSA-TLPFQGCDIWTLYELSWLNQKGLPQVAIGEVSIPATSANLIESKSFKLYLNSYNQTRFASWDEVQTRLVHDLSACAGETVTVNVKSLNEYTAEPIVTMQGECIDDQDIEIANYEFDDALLQGAAQGEEVSEVLHSHLLKS-----NQPDWGSVEIAYHGAKMNREALLRYLVSFREHNEFHEQCVERIFTDIMRYCQPQSLTVYARYTRRGGLDINPFRSSHQSAPNHNQRMARQ
General information:
TITO was launched using:
RESULT:
Template:
3RZP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124003 for 2027 contacts (-61.2/contact) +
2D Compatibility (PS) -26443 + (NN) -13245 + (LL) 1020
1D Compatibility (HY) -23600 + (ID) 6950
Total energy: -193221.0 ( -95.32 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_3RZP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RZP-query.scw
PDB file :
Tito_Scwrl_3RZP.pdb
: