Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAFLALCAVLLLVRG |
| 1FDM Chain:A ((26-48)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WAMVVVIVGATIGIKLFKKFTSK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FDM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3222 for 94 contacts (-34.3/contact) +
2D Compatibility (PS) -2275 + (NN) 44 + (LL) 17696
1D Compatibility (HY) -2000 + (ID) 100
Total energy: 10143.0 ( 107.90 by residue)
QMean score : -0.110
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