Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPHCETLLLEPIEGVLRITLNRPQSRNAMSLAMVGELRAVLAAVRDDRSVRALVLRGADGHFCAGGDIKDMAGARAAGAEAYRTLNRAFGSLLEEAQAAPQLLVALVEGAVLGGGFGLACVSDVAIAAADAQFGLPETSLGILPAQIAPFVVRRIGLTQARRLALTAARFDGREALRLGLVHFCEADADALEQRLEETLEQLRRCAPNANAATKALLLASESGELG-ALLDDAARQFAEAVGGAEGSEGTLAFVQKRKPVWAQ
3I47 Chain:A ((6-260))
--------LLYEIQDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISPYVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYA-SQISNNAPEAVKNSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWN-
General information:
TITO was launched using:
RESULT:
Template:
3I47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136304 for 2003 contacts (-68.0/contact) +
2D Compatibility (PS) -27902 + (NN) -13801 + (LL) 768
1D Compatibility (HY) -14000 + (ID) 4350
Total energy: -195589.0 ( -97.65 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_3I47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I47-query.scw
PDB file :
Tito_Scwrl_3I47.pdb
: