Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
2Z9B Chain:A ((1-191))
-SKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGAL-------TPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2Z9B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113654 for 1408 contacts (-80.7/contact) +
2D Compatibility (PS) -19835 + (NN) -4259 + (LL) 1728
1D Compatibility (HY) -17600 + (ID) 4550
Total energy: -158170.0 ( -112.34 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_2Z9B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z9B-query.scw
PDB file :
Tito_Scwrl_2Z9B.pdb
: