Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVQVITRDGEAEYAVLPWAEYQALLAAAGRPAASVAVETTAPAPPSASLLERREARGLSLEQVAREVGISPSYMAMIERGEREASEAILFALERVLGKATGA
3IVP Chain:A ((19-65))
---------------------------------------------------EARKKQGLTREQVGAMIEIDPRYLTNIENKGQHPSLQVLYDLVSLLN-----
General information:
TITO was launched using:
RESULT:
Template:
3IVP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24408 for 286 contacts (-85.3/contact) +
2D Compatibility (PS) -5151 + (NN) -1491 + (LL) 4424
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -31826.0 ( -111.28 by residue)
QMean score : 0.880
(partial model without unconserved sides chains):
PDB file :
Tito_3IVP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IVP-query.scw
PDB file :
Tito_Scwrl_3IVP.pdb
: