Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIHWKPFLAPSTLALKFAIKTLLAGGLALWCAFRFDLEQPQWALMTVLIVSQPLSGMVVAKGLFRLLGTLVGTAMSVLMIALFAQAPWLFLLAISLWLGLCTAASTSLRNHVSYAFVLSGYTVAIIGLPAVDQPLLVFEQAVARCTEICLGIICASAVSAILWPQRVEQNLDKQAHATWLLGMQAARGEIDPRQRQPQGLLNALSKIVEVDAQRDHAWFEGERGRRRAGALALLSRDLLSLLRTARGVARQRARLSEEEERRVERWLAALASALEGTDPASMQALREELAQVAVEPQWSNDQRYLLTRCSVLLLKAVNAEKGMRAVASGEVEGRVGSAGTLSWHRDLQMALFYGTRSALALLGLSVYWIYTAWPAASGAMLLAAVVCSLFANRDNAVAIGLSFLRGIVYAIPAAMLVSQWLLPQWNGFPLLCLAMGVPLFFATLGMAVPVTAGTATSFAIHFIVLVAPRNQMDYNLATLLNSAQGVLIGVGFAVVIFRLLTLRPGWLTRRLLDATCVDLGRLTRRPLAQAENWFGGRMADRLLRLARHANLLPEQERRRWDDGLLALDLGNELIHLRACLEGARGVLRKARDRFLGELGELLEAGPAGPRSDRLERISLPLREALERDARHDDEASRLARAALAQLLFTWQQWCHQEESHESA |
| 3DPO Chain:A ((155-207)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14778 for 292 contacts (-50.6/contact) +
2D Compatibility (PS) -6172 + (NN) -4710 + (LL) 51304
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 21894.0 ( 74.98 by residue)
QMean score : 0.886
|
|
|