Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTAKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEPGTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRDLGHNDRPSR
2FA8 Chain:A ((4-89))
---TKPRIAIRYCTQCNWLLRAGWMAQEILQTFASDIGEVSLIPSTGGLFEITVDGTIIWERKRDGGFPGPKELKQRIRDLIDPERDLG-------
General information:
TITO was launched using:
RESULT:
Template:
2FA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11339 for 563 contacts (-20.1/contact) +
2D Compatibility (PS) -9301 + (NN) -7241 + (LL) -232
1D Compatibility (HY) 0 + (ID) 950
Total energy: -29063.0 ( -51.62 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_2FA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FA8-query.scw
PDB file :
Tito_Scwrl_2FA8.pdb
: