Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAVIRVDSLNKTFARKQ----ALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRAD-IGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLAD-FAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGSSEYLSEGFLNELYGAEGDTPLLFSDRARRGAESQPELTLARA |
| 1F3O Chain:A ((2-223)) | ----IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCL---DKPTEGEVYI--DNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFK---YRGAMS--GEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEV----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139190 for 1749 contacts (-79.6/contact) +
2D Compatibility (PS) -23190 + (NN) -5300 + (LL) 3840
1D Compatibility (HY) -21600 + (ID) 4500
Total energy: -189940.0 ( -108.60 by residue)
QMean score : 0.508
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