Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLEPGMARIRVKDLRLRTFIGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPHALRFAESVSITLAGHR
2O90 Chain:A ((1-112))
-------MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVII----
General information:
TITO was launched using:
RESULT:
Template:
2O90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76635 for 766 contacts (-100.0/contact) +
2D Compatibility (PS) -12070 + (NN) -256 + (LL) 252
1D Compatibility (HY) -10400 + (ID) 1400
Total energy: -100509.0 ( -131.21 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_2O90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O90-query.scw
PDB file :
Tito_Scwrl_2O90.pdb
: