Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQNSLLDGRRVLLTGGARGLGYAFAEAAARAGARVVIADILEERVQRSARELAEQ-GLDISGLPLDLADPVSIERCVAAAVERLGGLDGLVNNASITNSGGKSCEELEIEVFDRVLQVNVRGTWLMTRACLPALRESGRGAVVNLASDTPLWGAPNLLAYSASKGALIAMTRSLARELGGDGITVNAIAPGLVEVEATEYVPAARHRLYREQRALQRGQQPADVCGAVLFALSDLSRFITGQTLPVNGGFVMP
2P68 Chain:A ((5-247))
------LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM---
General information:
TITO was launched using:
RESULT:
Template:
2P68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145330 for 2064 contacts (-70.4/contact) +
2D Compatibility (PS) -26474 + (NN) -10135 + (LL) 284
1D Compatibility (HY) -20000 + (ID) 4400
Total energy: -206055.0 ( -99.83 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2P68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P68-query.scw
PDB file :
Tito_Scwrl_2P68.pdb
: