Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSSRSVNPRPSFAPRALSLAIALLLGAPAFAANSGEAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFMGQAVAATDTIETDTLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLREDSGQWQDTNIEALNWSFETTLLNAHAGVAQRFSEYRTDLDELAPEDKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLT----WLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLREDYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF |
3EA6 Chain:A ((58-150)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPINI-----WINGNHKTIST-----NKVSTNKKF--VTAQEIDVKLRKYLQEEYN-----IYGHNGTKKGEE---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10580 for 491 contacts (21.5/contact) +
2D Compatibility (PS) -9223 + (NN) -1220 + (LL) 19420
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: 11807.0 ( 24.05 by residue)
QMean score : 0.138
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