Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSS--SRPLAAHAEQSREIEDWFARLGTQVVRDWSGLP---LKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNGVDL--RQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
4F13 Chain:A ((50-306)) | ---------------------------------------------------ATPNPQQGEMVIPRRYLSGNHGPVNPDYEPVVTL------YRDFEKISATLGNLYVATGKPVYATCLLNMLDKWAKADAL----LNYDPKS-QSWYQVEWSAATAAFALSTMMAEPNVDTAQRERVVK-WLNR----VARHQTSFPGGDTSCCNNHSYWRGQEATIIGVISKDDELFRWGLGRYVQAMGLINEDGSFVHEMTRHEQSLHFQNYAMLPLTMIAETASRQGIDLYAYKENGRDIHSARKFVFAAVKNPDLIKKYASEPQDTRAFK-------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4F13.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -58765 for 2010 contacts (-29.2/contact) +
2D Compatibility (PS) -27261 + (NN) -18253 + (LL) 6484
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -114945.0 ( -57.19 by residue)
QMean score : 0.472
|
|
|