Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVRPSQTPKGQCWQVCLDQQAVNFRSESEARRFVDRLEARLRAPHVLPELKQRTA
2JP2 Chain:A ((98-122))
--------------------RKFGLTFQSPADARAFDRGVRKAIE-------------
General information:
TITO was launched using:
RESULT:
Template:
2JP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1390 for 88 contacts (-15.8/contact) +
2D Compatibility (PS) -2805 + (NN) -771 + (LL) 2468
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -4348.0 ( -49.41 by residue)
QMean score : 0.813
(partial model without unconserved sides chains):
PDB file :
Tito_2JP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JP2-query.scw
PDB file :
Tito_Scwrl_2JP2.pdb
: