Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHNPHESKTDLGAPLDGAVMVLLVDDQAMIGEAVRRSLASEAGIDFH--FCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAGANDYLVKLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQPVPPAPAG |
| 2WB4 Chain:A ((156-449)) | --------------------VLIVDDN----ERQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIV-NAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQI-------QRKRYTDYLRNNLDHSLE-------LAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTISIGVSA--TAGEGDTPEALLKRADEGVYQAKASGRNAV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146122 for 2146 contacts (-68.1/contact) +
2D Compatibility (PS) -32646 + (NN) -21235 + (LL) 3244
1D Compatibility (HY) -13200 + (ID) 5450
Total energy: -215409.0 ( -100.38 by residue)
QMean score : 0.550
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