Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALQRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKADAGTIRADFAVSIDENAVHGSDSEASAAREIAYFFAATEVCERIR
4S0M Chain:A ((1-143))
MAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR
General information:
TITO was launched using:
RESULT:
Template:
4S0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53236 for 1079 contacts (-49.3/contact) +
2D Compatibility (PS) -14994 + (NN) -1171 + (LL) 0
1D Compatibility (HY) -14800 + (ID) 5250
Total energy: -89451.0 ( -82.90 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4S0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S0M-query.scw
PDB file :
Tito_Scwrl_4S0M.pdb
: