Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFERVREDIQSVFHRDPAARNALEVLTCYPGLHAVWLHRLAHGLWTSGWKWLARLVSNFGRWMTGIEIHPGARIGRRFFIDHGMGIVIGETAEIGDDVTLYQGVTLGGTTWNKGKRHPTLGNNVVVGAGAKVLGPFTVGEGAKVGSNAVVTKEVPPGATVVGIPGRIIMREDSEQQAKRQAMAEKLGFDAYGVSQDMPDPVARAIGQLLDHLQAVDGRLEGMCQALTALGSDYCAKDLPVLREEDFAGVKDEDGNPAA
1SST Chain:A ((80-240))
-------DIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGT-------HPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132364 for 1278 contacts (-103.6/contact) +
2D Compatibility (PS) -16508 + (NN) -7026 + (LL) 6620
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -165678.0 ( -129.64 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1SST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SST-query.scw
PDB file :
Tito_Scwrl_1SST.pdb
: