Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYPLMHGFTLLLPEDYRVHGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGGAYALILLDAAEFSGAPCQPRALPAGNPLLAQTEPPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPSEYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPEMSPFYVEFEEYLGGYNFGGGNAQLDFRDMRFDWACG |
| 1RPB Chain:A ((7-18)) | ------------------------------------------------------------------------------------------------------------------------CNDFAGCGYAVV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 670 for 40 contacts (16.8/contact) +
2D Compatibility (PS) -1122 + (NN) 770 + (LL) 11748
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 10266.0 ( 256.65 by residue)
QMean score : -0.681
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