Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEPLILDAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL--ALDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDY-PMGHEVSLEEIHDIGAWLRKRL
4F21 Chain:A ((25-244))
MNYELMEPAKQARFCVIWLH--GADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLSLNRVVDVE-INSSIAKVNKLIDSQVNQ-IASENIILAGFSQGGIIATYTAITS-QRKLGGIMALSTYLPAWDNFKGKITSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTF
General information:
TITO was launched using:
RESULT:
Template:
4F21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139329 for 1761 contacts (-79.1/contact) +
2D Compatibility (PS) -22366 + (NN) -9907 + (LL) 44
1D Compatibility (HY) -22000 + (ID) 4300
Total energy: -197858.0 ( -112.36 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_4F21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F21-query.scw
PDB file :
Tito_Scwrl_4F21.pdb
: