Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNRVRELRAERGWSQAELAGKLEVSRQTVNAIETGRYDPSLPLAFKLARVFGLAIEAIFDDREGQLD
2XI8 Chain:A ((4-61))
--NNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIF--------
General information:
TITO was launched using:
RESULT:
Template:
2XI8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30796 for 390 contacts (-79.0/contact) +
2D Compatibility (PS) -6441 + (NN) -3861 + (LL) 408
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -48890.0 ( -125.36 by residue)
QMean score : 0.754
(partial model without unconserved sides chains):
PDB file :
Tito_2XI8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XI8-query.scw
PDB file :
Tito_Scwrl_2XI8.pdb
: