Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTLFRDYPNGRYAMTFDVIIVGGSYAGISAGMQLARARRRVLVMDTGLRRNRFARASHGFLGQDGRDPAAIADDARAQLLAYPSVEWLSEAAVAAKKEADG----FVVKAANGERFTARRLILASGVADELPEIPGLAERWGRHVFHCPYCHGYELDGGPIGVLAASPLAIHHALMLPDWG-ATTFFLNGVFEPDAEQMSRLDRRGVTIE---REAVVALGGARADVTLASGRTITLAGLFTQPRTRMASPLAALLGCEFEDGPSGPFIRTDGMRETSVPGVFACGDAALAAGNVAIAVGDGARTGGAAHHSLLFR |
| 4NTD Chain:A ((31-324)) | -----------------IDVVVIGAGAGGLNAALVLARARRRVVLVDSGAPRNAPSAHMQGFLSRDGMAPSALLETGRAEVSGY-GAEFIRGEVDDVEREGEDDAPRFTVRLVGGVALSTRRVVVATGLRDELPDIPGVRERWGKDLLHCPYCHGYEVSDQPLGVLGTSPGAVRHALLLRQWSDDVVLFRHGLELTDDDRRALSARQVPVIEGTVKRLVVEDDRLRG-VELAEDSGVARSTVFVVPRMVPRDGLLTALGCER--GADG-WIATDRSGLTSVPGVWAVGNVVDPRALVVSSAGMGSAAAFALNHQLV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198038 for 2406 contacts (-82.3/contact) +
2D Compatibility (PS) -31006 + (NN) -12345 + (LL) 1032
1D Compatibility (HY) -18400 + (ID) 5350
Total energy: -264107.0 ( -109.77 by residue)
QMean score : 0.454
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