Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMF--FDAAAPGV-PPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAAL-ARELPAAELLRTLVEELRG |
2Z6J Chain:A ((1-302)) | MKTRITELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSP------------------------------------FVED--IVDLVIEEGVKVVTTGAGNPSKYMERFHEA-GIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIG---------KLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQ---HAVRAIKNQLTRDFELAEKDAF---------EQMGAGALAKAVVHGDVDGGSVMAGQIAGLVSKEETAEEILKDL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179319 for 2630 contacts (-68.2/contact) +
2D Compatibility (PS) -31483 + (NN) -21362 + (LL) 3256
1D Compatibility (HY) -18000 + (ID) 5650
Total energy: -252558.0 ( -96.03 by residue)
QMean score : 0.515
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