Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGQRYRETPLDIERLRRLNRATVERYMAMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPIQKLRALGIAVPQIKRDGIPT
3DZL Chain:A ((40-185))
----------------RQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLPS
General information:
TITO was launched using:
RESULT:
Template:
3DZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35686 for 966 contacts (-36.9/contact) +
2D Compatibility (PS) -15688 + (NN) -4866 + (LL) 1068
1D Compatibility (HY) -13600 + (ID) 4050
Total energy: -72822.0 ( -75.39 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_3DZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DZL-query.scw
PDB file :
Tito_Scwrl_3DZL.pdb
: