Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLEQILTPGRSLVNVPGGSKKRVLEQIANLVARELPEFDAQTIFENLVAREKLGSTGFGNGIAIPHCRLSGCQSPIS-AVLHLDAPVDFDALDGAPVDLLFVLLVPEAATEEHLELLRQIAAMLDRADVRDRLRSAPTAEALYQIVVDVQNGQ
3OXP Chain:A ((62-147))
------------------------------------------------------------GPGIAMPHARPEDGVNRLSLALTVITEGVTFNAEGNDPVKLLIVLAATD--SNSHIEAISQLAQLFDTASDVQALLNAKTPQDILSVI-------
General information:
TITO was launched using:
RESULT:
Template:
3OXP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51431 for 503 contacts (-102.2/contact) +
2D Compatibility (PS) -9945 + (NN) -10909 + (LL) 5100
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -74135.0 ( -147.39 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3OXP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXP-query.scw
PDB file :
Tito_Scwrl_3OXP.pdb
: