Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALERSDVEKIAHLARLGLSEADLPRTTETLNNILGLIDQMQAVDTSGVEPLAHPLEATQRLRPDAVTETDHRDAYQTIAPAVEEGLYLVPKVIES
2DF4 Chain:C ((6-95))
----REEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIM--
General information:
TITO was launched using:
RESULT:
Template:
2DF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4356 for 359 contacts (-12.1/contact) +
2D Compatibility (PS) -9055 + (NN) -371 + (LL) 708
1D Compatibility (HY) -2000 + (ID) 1550
Total energy: -16624.0 ( -46.31 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_2DF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DF4-query.scw
PDB file :
Tito_Scwrl_2DF4.pdb
: