Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGGVIAGWVEALQLMNAGSKWRLHVPSELAYGGQAV-GSIPPHSVLVFDVELLEIL
2UZ5 Chain:A ((2-133))
-------------------------------------------------------------------------NKKADENKVKGEAFLTENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISV-
General information:
TITO was launched using:
RESULT:
Template:
2UZ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44902 for 974 contacts (-46.1/contact) +
2D Compatibility (PS) -14251 + (NN) -4612 + (LL) 5072
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -75693.0 ( -77.71 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_2UZ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UZ5-query.scw
PDB file :
Tito_Scwrl_2UZ5.pdb
: