Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFG-RKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELID-VDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLM--LVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKA---TYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
1MUM Chain:A ((2-256))
-----LHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQE-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1MUM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170131 for 2068 contacts (-82.3/contact) +
2D Compatibility (PS) -26990 + (NN) -11096 + (LL) 3284
1D Compatibility (HY) -12800 + (ID) 3950
Total energy: -221683.0 ( -107.20 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1MUM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MUM-query.scw
PDB file :
Tito_Scwrl_1MUM.pdb
: