Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRKLAAVSLLSLLSAPLLAAECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
1E65 Chain:A ((1-128))
--------------------AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
General information:
TITO was launched using:
RESULT:
Template:
1E65.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67891 for 966 contacts (-70.3/contact) +
2D Compatibility (PS) -13467 + (NN) -1609 + (LL) 2324
1D Compatibility (HY) -16800 + (ID) 6400
Total energy: -103843.0 ( -107.50 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_1E65.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E65-query.scw
PDB file :
Tito_Scwrl_1E65.pdb
: