Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHDD-ADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAE-QGEAFLAAGLDIPLNVWL--KLDSGMHRLGF-DPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGLLD--LDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLS-AAELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWG----AGLSVDEVARACGTLGYELLSKVTARVPRRYSH |
4A3Q Chain:A ((7-368)) | -RSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVL-GVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHF--------DMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKT------------------TTIALLPIGYADGYLRIM-QGSFVNVNGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241613 for 2714 contacts (-89.0/contact) +
2D Compatibility (PS) -34922 + (NN) -9744 + (LL) 1796
1D Compatibility (HY) -24400 + (ID) 5450
Total energy: -314333.0 ( -115.82 by residue)
QMean score : 0.408
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