Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGKKKSEKESSWIGEIEKYSRQIWLAGLGAYSKVSKDGSKLFETLVKDGEKAEKEAKSDVDAQVGAAKASARSAKSKVDEVRDRALGKWSELEEAFDKRLNSAISRLGVPSRNEVKELHSKVDTLTKQIEKLTGVSVKPAAKAAAKPAAKPAAKPAAKTAAAKPAAKPAAKAAAKPAAKPAAKKTAAKTAAAKPAAKPAAKPTAKAAAKPATKPAAKAAAKPAAKPAAAKPAAKPAAKPAAATAAKPAAKPAAKPAAKKPAAKKPAAKPAAAKPAAPAASSSAPAAPAATPAASAPAANAPATPSSQG |
| 1NFN Chain:A ((108-159)) | ------------------------------------------------------------------------------MEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9279 for 242 contacts (38.3/contact) +
2D Compatibility (PS) -5272 + (NN) 711 + (LL) 15956
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 18924.0 ( 78.20 by residue)
QMean score : 0.352
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