Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSADKPEQPEHDQEMPLVSHLTELRTRLLRSVAAIFLIFAGLFYFSQKIYTLVSEPLRRFLPEGTSMIATDVASPFLAPFKLTMVVALFLAMPVILAQVWGFIAPGLYKHEKRVALPLLVSSIILFYAGMAFAYFLVFPMIFHFFASVTPEGVAMMTDINSYLDFVLTLFFAFGVAFEIPVATVLLIWIGVVDVDYLKKIRPYVIIGCFVVGMVLTPPDIFSQTMLAVPMWLLFEIGLLFGRLV---RKRGEHPDDQPASDGDQPPATRQ |
| 2YDO Chain:A ((33-133)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------LNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFV--LVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKG------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76047 for 500 contacts (-152.1/contact) +
2D Compatibility (PS) -8615 + (NN) 5105 + (LL) 14508
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -75099.0 ( -150.20 by residue)
QMean score : 0.120
|
|
|