Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPPVVIYTTAWCPYCIRAKQLLQRKGVDFQEIACDG-KPELRAELARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLSA
3QMX Chain:A ((18-99))
---IEIYTWSTCPFCMRALALLKRKGVEFQEYCIDGDNEAREAMAARANGKRSLPQIFIDDQHIGGCDDIYALDGAGKLDPLLHS
General information:
TITO was launched using:
RESULT:
Template:
3QMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49151 for 552 contacts (-89.0/contact) +
2D Compatibility (PS) -9092 + (NN) -4263 + (LL) -72
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -72678.0 ( -131.66 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_3QMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QMX-query.scw
PDB file :
Tito_Scwrl_3QMX.pdb
: