Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTILVTGSAGFIGANFVLDWLALHDE-PVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIGDSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEPEAKAAFRFLHVSTDEVYGSLAPSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLEAGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAIDATRLERELGWKPAETFETGIRKTVRWYLDNQDWVANVTSGAYREWVGKQYA |
| 4EGB Chain:A ((27-340)) | --ILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAES---------IPFYDTNVIGTVTLLELVKKY---------PHIKLVQVSTDEVYGSLGKTG-RFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLL--------GKT-KKDIEYVTD--GHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNEEW------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149521 for 2586 contacts (-57.8/contact) +
2D Compatibility (PS) -32442 + (NN) -17719 + (LL) 2552
1D Compatibility (HY) -36000 + (ID) 7800
Total energy: -240930.0 ( -93.17 by residue)
QMean score : 0.531
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