Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
2HRM Chain:A ((2-137))
MKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFD---------------
General information:
TITO was launched using:
RESULT:
Template:
2HRM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100322 for 907 contacts (-110.6/contact) +
2D Compatibility (PS) -14420 + (NN) -3582 + (LL) -256
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -141430.0 ( -155.93 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_2HRM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HRM-query.scw
PDB file :
Tito_Scwrl_2HRM.pdb
: