Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINKDSLTHHISQQFNAELEDVRSHLLAMGGLVEKQVNDAVNALIDADSGLAQQVREIDDQINQMERNIDEECVRILARRQPAASDLRLIISISKSVIDLERIGDEASKVARRAIQLCEEGESPRGYVEVRHIGSQV------QKMVQEALDAFARFDADLALSVAQYDKTVDREYKTALRELVTYMMEDPRAISRVLNIIWALRSLERIGDHARNIAELVIYLVRGTDVRHIGLTRMKEEVENNRGE
1XWM Chain:A ((4-210))
-------------TFADDLASLHNKLIEMGRLTEVALQQAIEAFQTQNANLAMAVIDGDGSIDALEEEVNDFALWLIAAQQPVATDLRRIVAAIKIASDIERIADFAVNIAKACIRI---GGQPF----VMDIGPLVLMYRLATDMVSTAIAAYDREDASLAAQIADMDHRVDEQYGEMMASLLAVAKTDAATLAQMNVLALVARYIERTADHATNIAEHLVYLVKG---------------------
General information:
TITO was launched using:
RESULT:
Template:
1XWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73697 for 1546 contacts (-47.7/contact) +
2D Compatibility (PS) -21792 + (NN) -11220 + (LL) 2704
1D Compatibility (HY) -14400 + (ID) 3400
Total energy: -121805.0 ( -78.79 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1XWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XWM-query.scw
PDB file :
Tito_Scwrl_1XWM.pdb
: