Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDTLLPVLLFAALALAVLGAAKRFLMWRRGRPAKVDWIGGLLQMPRRYLVDLHHVVERDRYMSRTHVATAGGFVLAALLAILVHGFGLHGRILGFALLAATALMFVGALFVARRRLDPPSRLSKGPWMRLPKSLLAFAASFFLATLPVAGILPEGFGGWFLAGLLAIGVAWGVSELFLGMTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKALDLADPQAPLGVEKPSDFTWNQLLGFDACVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAG--GNDAKFAGSPYPGKPLGEHGGGPHQPIVALDGKALVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEVLDNLIATDNPGGFAPGGRLNWAADLNLPLMSEKKSADVLFWVGDGAFDMRNQRTLRAFVKILKAAAVDFAVLGLEERDSGDVARRLGDEATFQNLARRNIATLAKYRFTRIVSCDPHSFHVLKNEYGALGGDYQVLHHSTFIDELLRAGTLQPGRSKAGSVTYHDPCYLGRYNGEYEAPRNVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMADIRETGAELVAVGCPQCTAMLEGVVAPRPEIKDIAELVAEALIEQAEAPAKKPLRREAVAEVH |
| 3CIR Chain:B ((145-219)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSGCINCGLCYAACPQFG----LNP-EFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNG-------------------VWSCTFVGYCSEVCP---KHVD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32655 for 453 contacts (-72.1/contact) +
2D Compatibility (PS) -7617 + (NN) -5621 + (LL) 38992
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -14051.0 ( -31.02 by residue)
QMean score : 0.113
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