Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNINATLIGQSVAFFIFVLFCMKFVWPPVIAALQERQKKIADGLDAANRAAR-DLELAHEKAGQQLREAKAQAAEIVEQAKKRANQIVDEARDQARTEGERLKAQAQAEIEQELNSVKDALRAQVGALAVTGAEKILGASIDANAHEQLVSKLAAEI |
2LEM Chain:A ((89-168)) | --------------------------------LEEVKQKVQPYLDEFQKKWKEDVELYRQKASPQGAELQESARQKLQELQGRLSPVAEEFRDRMRTHVDSLRTQLAPHSEQ--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27605 for 383 contacts (72.1/contact) +
2D Compatibility (PS) -8702 + (NN) -5130 + (LL) 7404
1D Compatibility (HY) -1600 + (ID) 1150
Total energy: 18427.0 ( 48.11 by residue)
QMean score : 0.460
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