Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYRPARVTSTSRFLNPYVVCFIVVAGVVILAVTIALLVYFLAFDQKSYFYRSSFQLLNVEYNSQLNSPATQEYRTLSGRIESLITKTFKESNLRNQFIRAHVAKLRQDGSGVRADVVMKFQFTRNNNGASMKSRIESVLRQMLNNSGNLEINPSTEITSLTDQAAANWLINECGAGPDLITLSEQRILGGTEAEEGSWPWQVSLRLNNAHHCGGSLINNMWILTAAHCFRSNSNPRDWIATSGISTT----FPKLRMRVRNILIHNNYKS--ATHENDIALVRLENSVTFTKDIHSVCLPAATQ---NIPPGSTAYVTGWGAQEYAGHTVPELRQGQVRIISNDVCNAPHSYNGAILSGMLCAGVPQGGVDACQGDSGGPLVQEDSRRLWFIVGIVSWGDQCGLPDKPGVYTRVTAYLDWIRQQTGI |
2WPH Chain:S ((1-234)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVE---TGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGS-GYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRS--TKFTITNNMFCAGFHEGGRDSCQGDSGGPHVTEV-EGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKTKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159131 for 1953 contacts (-81.5/contact) +
2D Compatibility (PS) -24676 + (NN) -9264 + (LL) 13880
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -199891.0 ( -102.35 by residue)
QMean score : 0.256
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