Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MQPSPPPTELVPSERAVVL---LSCALSAL-GSGLLVATHALWPDLRSRARRLLLFLSLADLLSAASYFYGVLQNFAGPSWDCVL-QGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRLLWAFHV---VSWGV---PLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLW------MLLTGKLWEMLAYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVWSTVRFVLTLCGSPAVQTPVLVVLHGIGNTFQG--GANCIMFVLCTRAVRTRLFSLCCCCCSSQPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST |
| 3P4G Chain:A ((23-323)) | HSFDHYIGSAFDASNNNVAVTGNVSATLNVLAGDDKVSIDGNVEDVLVAANVAVLDMGTGNDQLYVAGDVLGKID--AGTGNDEIYIKGDVSAAVDAGTGNDEVYIGGNLSGDLDA---GTDNDNIQIGGDVNAALNAGTGNDNLIIGHDVSGIVNMGTDNDTVEVGR---TINASGKVLLDTGDDSLLVSGDLFGEVD------------------GGTGNDTIIIAGKVSGNIQGGTGND-------IVRVQSQVWAEANISLG------TGDDVLIVEHELHGTVAGNEGDDSIYLKFYTKEQYN----------NNSDLRNRVANFEHIRVSDG-----VVKGSPADFADY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232582 for 2483 contacts (-93.7/contact) +
2D Compatibility (PS) -29145 + (NN) 2295 + (LL) 4408
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -264924.0 ( -106.70 by residue)
QMean score : 0.083
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