Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPLNRTEVSEFFLKGFSGYPALEHLLFPLCSAMYLVTLLGNTAIMAVSVLDIHLHTPVYFFLGNLSTLDICYTPTFVPLMLVHLLSSRKTISFAVCAIQMCLSLSTGSTECLLLAITAYDRYLAICQPLRYHVLMSHRLCVLLMGAAWVLCLLKSVTEMVISMRLP-----FCGHHVVSHFTCKILAVLKLACGNTSVSEDFLLAGSILLLPVP------LAFICL--------------SYLLILATIL-RVPSAARCCKAFSTCL----------AHLAVVLLFYGTIIFMYLKPKSKEAHISDEVFTVLYAMVTTMLNP-----------TIYSLRNKEVKEAARKV----WGRSRASR--------------------------------------------------------------------------------------------------------------------- |
3ODU Chain:A ((37-502)) | --PCFREENANF----------NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVIT-LPFWAVDAVANW-YFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLEVLFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207258 for 1924 contacts (-107.7/contact) +
2D Compatibility (PS) -31015 + (NN) -11022 + (LL) 736
1D Compatibility (HY) -15600 + (ID) 2450
Total energy: -266609.0 ( -138.57 by residue)
QMean score : 0.219
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