Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELLTNNLKFITDPF---VCRLRHLSPTPSEEHMKNKNNV-----TEFILLGLTQNPEGQKVLFVTFLLIYMVT-IMGNLLIIVTI---------MASQSLGSPMYF-----------FLASLSFIDTVYST-----------AFAP----KMIVDLLSEKKT----ISFQGCMAQLFMDHLF---------AGAEVILLVVMAYDRYMAICKPLHELITMNRRVCVLMLLAAWIG---GFLHSLVQFLFIYQLPFCGPNVIDNFLCDLYPLLKLACTNTYVTGLSMIANGGAICAVTFFTILLSY--------GVILHSLKTQSLEGKRKAFYTCASHVTVVILFFVPCIFL------------------YARPNSTFPIDKSMTVVLTFITPMLNPLIYTLKNAEMKSAMRKL-------------WSKKVSLAGKWLYHS |
| 4XGC Chain:D ((5-457)) | DRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLG--PRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGF-SPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258185 for 2278 contacts (-113.3/contact) +
2D Compatibility (PS) -35043 + (NN) -2493 + (LL) 284
1D Compatibility (HY) -17600 + (ID) 2750
Total energy: -315787.0 ( -138.62 by residue)
QMean score : 0.146
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