Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSSCNFTHATFVLI--GIPGLEKAHF-WVGFPLLSMYVVAMFGNCIVVF-----------------IVRTERSLHAPMYLFLCMLA--AIDLALSTSTM--PKILALFWFDSREISFEACLTQMFFIHALSAIESTILLAMAFD----RYVAICHPLRHAAVLN--------NTVTAQIGIVAVV-------------RGSLFFFPLPLLIKRLAFCHSNVLSHSYCVHQDVMKLAYADTLPNVVYGLTAILLVMGVDVMFISLS-----YFLIIRTVLQLPSKSERAKAFGTCVSHI---GVVLAFYVPLIGLSVVHRFGNSLHPIVRVVMGDIYLLLPPVI---NPIIYGAKTKQIRTRVLAMFKISCDKDLQAVGGK- |
| 3FHC Chain:A ((9-405)) | IPEREMKDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEA-QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG--TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNAPVLML--LSTDGVLCPFYMIN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -368283 for 2495 contacts (-147.6/contact) +
2D Compatibility (PS) -33831 + (NN) 7676 + (LL) 488
1D Compatibility (HY) -11600 + (ID) 3400
Total energy: -408950.0 ( -163.91 by residue)
QMean score : 0.104
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