Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MTNLNASQANHRNFILTGIPG------TPDKNPWLAFPLGFLYTLTLLGNGTILAVIKVEPSLHEPTYYFL---SILALTDVSLSMSTLPSMLSIYWF----------NAPQIVFDACIMQMFFIHVFGIVESGVLVSMAFDRFVAIR-----------NPLHYVSILTHDVIRKTGIAVLTRA---VCVVFPVPFLIKCLPFCHSNVLSH-------------SYCLHQNMMRLACAS-----TRINSLYG---------------LIVVIFTLGLDVL---------LTLLSY----VLTLKTVL----GIVSRGERLKTLSTCLSHMSTVLLFYVPFMGAASMIHRFWEHLSPVVHMVMADIY---LLLPPVLNPIVYSVKTKQI- |
| 1O75 Chain:A ((7-414)) | ETSYGYATLSYADYWAGELGQSRDVLLADLDAGMFDAVSRATHGHGAFRQQFQYAVEVLGE-KVLSKQETEDSRGRKKWEYETDPSVTKMVRASASFQDLGEDGEIKFEAVEGAVALADRASSFMVDSEEYKITNVKVHGMKFVPVAVPHELKGIAKEKFHFVEDSRVTENTNGLKTMLTEDSFSARKVSSMESPHDLVVDTVGTGYHSRFGSDAEASVMLKRADGSELSHREFIDYVMNFNTVRYDYYGDDASYTNLMASYGTKHSADSWWKTGRVPRISCGINYGFDRFKGSGPGYYRLTLIANGYRDVVADVRFLPKYEGNIDIGLKGKVLTIGGADAETLMDAAVDVFADGQPKLVSDQAVSLGQNVLSADFTPGTEYTVEVRFKEFGSVRAKVVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218763 for 1945 contacts (-112.5/contact) +
2D Compatibility (PS) -31900 + (NN) 5108 + (LL) -172
1D Compatibility (HY) -5600 + (ID) 2750
Total energy: -254077.0 ( -130.63 by residue)
QMean score : -0.042
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