Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MLARNNSLVTEFILAGLTDH------------PEFRQP--LFFLFLVIYIVTMVGNL------------GLITLFGLNSHLHTPMYY---FLFNLSFIDLCYSSVFTPKMLMNFVSKKNIISNVGCMTRLFFFLFFVI--------SECYMLTSMAYDRYVAICNP---------LLYKVTMSH-----QVCSMLTFAAYIMGLAGATAHTGCMLRLTFCSANI---------INHYLCDILPLLQLSCTSTYVN------EVVVLIVVGTNITVPSCTILISYVFIVTSILHIK--STQGRSKAFSTCSSHVIALSLFFGSAAFMYIKYSSGSMEQGKVS----SVFYTNVVPMLNPLIYSLRNKDVK-------VALRKALIKIQR-----------RNIF-------------------------------- |
| 2Q06 Chain:A ((22-496)) | ATEIRASVGRMVGGIGRFYIQMCTELKLSDQEGRLIQNSITIERMVLSAFDERRNRYKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFE-DLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246999 for 2212 contacts (-111.7/contact) +
2D Compatibility (PS) -31933 + (NN) -3005 + (LL) 56
1D Compatibility (HY) -6000 + (ID) 3050
Total energy: -290931.0 ( -131.52 by residue)
QMean score : 0.146
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