Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLSAGLGLLMLVAVVEFLIGLIGNGSLVVWSFREWIRKFNWSSYNLIILGLAGCRFLLQWLIILDLSLFPLFQSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIINLLLTVQIGLTFYHPPQGNSSIRYPFESWQYLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSAGRRDVRAKAHITALKSLGCFLLLHLVYIMASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP |
| 4O6Y Chain:A ((10-219)) | PIFMVVRVLGFIIAALVLTWTVHYRGGLAL--------------SSDN--------KDHIFNVHPVMMVIGLILFNGEAMLAYKSV---------------------QGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENF--------------YSLHSWLGLACLFLFAFQWAAGFVTYWYPGG---SRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQVITRYS-----------------TEAMLVNTMGVLILILGGFVILGVVT--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149519 for 1533 contacts (-97.5/contact) +
2D Compatibility (PS) -21877 + (NN) -10342 + (LL) 7964
1D Compatibility (HY) -12000 + (ID) 2100
Total energy: -187874.0 ( -122.55 by residue)
QMean score : 0.209
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