Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKSQLVKKVFDSVAYRYDIMNDIISLGIHRLWKDKMVNSVHFTKNSQVLDVAGGTGDIAIRIVRREPSVQVTVCDINQNMLSRGRNKAINSNQLNFNWVCANAESLPFEDSEFDCCTIAFGIRNVSDRKKALSEIHRVLKPNGQFICLEFAPMHYKNE-IFTKLYDLYSLKVIPKIGNIVTKDESPYQYLVRSIREFPVQTDFKMEIEEVGFKKVKFHNMSYGIVALHTGTK |
3CCF Chain:A ((48-208)) | -----------------------------------DLLQLLNPQPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQNYP-----HLHFDVADARNFR-VDKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGG--KGNIKYILEALYNAL-----ETLG------IHNP--QALNPWYFPSIGEYVNILEKQGFDVTYAALFNRPTTLAEGEFG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79275 for 1174 contacts (-67.5/contact) +
2D Compatibility (PS) -17289 + (NN) -2630 + (LL) 4300
1D Compatibility (HY) -2800 + (ID) 1550
Total energy: -99244.0 ( -84.53 by residue)
QMean score : 0.457
|
|
|