Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARTVNVLLPLPIDQLFSYAVKENTDVSVGDYVVVPFGKKRLIGIVWKYSNKNDQELKFIEQKINLPNIRLKLIAFAEWVAQYNVISIGMLAKVIMGGVLKVNHLDKLVHVEQEQEVSEINYQLNPEQQIASNKIISNLNEYSVTLLDGETGSGKTEVYLSVIAQLIKNYSSTPATPNAARTLSFQCPDTQLYKHCNLGPPVGYHPSTLILGSSFPRNLIKNVHFNVRAATPIPSLQTKFLDSSVSYLHDIFMFKAKPTIIFNTLSSPSAGMTPKYVETASNKGSIQVLILLPEIVLTSQLVNRIRSQTSR---NLAEWHSGLTLKTRRNNWLNTANGNAQIIIGARSALF-------LPYKNLKLIIVDEEHDSSFKQEQGTIYNARDMAIILAKIENIPIILSSATPLLETIYHVKN--GNYNYVKLAKRFGGAELPLIK--VVDTRNNKQWISNELFEGIKQTIEKKQQVMLFLNRRGYAQLAVCKKCGYKIPCSNCAVWLVYHKKKNALLCHHCSYQLKLPEKCSNCQSKQSLFLYGIGIERLLEETVKLIPNAKTAIISSDQK--SVSNVIDLVLKEELNIIIGTQIIAKGHNFPKLTLVGVINADLSLENADLRAAEKTYQLLHQVAGRSGRFNEKGMVIVQTNHPESSVIKALQHQKRDSFYEIELESRYKAKMPPFSRLIALIICGKNQIATQKAANEIASFLHNQCLSKKLPSSSSLSFQCLTLKSRKKEFEILGPSPAAISFLNNKYRYRVLLKIYNKHSLSVQKKLKYWIKNCNLSPNIIVTIDVDPISFF |
2DB3 Chain:A ((129-407)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQ----NECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGF---SEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGI--VGGACSDVKQTIYEVNK-YAK-RSKLIEILS---EQADGTIVFVETKRG-------------------------------------------------------------ADFLASFLSEK--EFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKI------------DDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLR----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147361 for 2074 contacts (-71.1/contact) +
2D Compatibility (PS) -28613 + (NN) -10935 + (LL) 34600
1D Compatibility (HY) -4800 + (ID) 2000
Total energy: -159109.0 ( -76.72 by residue)
QMean score : 0.451
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