Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLTHLNEENQPKMVDIGDKETTERIALASGRISMNKEAYDAIINHGVKKGPVLQTAIIAGIMAAKKTSELIPMCHPIMLNGVDIDILEEKETCSFKLYARVKTQAKTGVEMEALMSVSIGLLTIYDMVKVIDKSMTISGVMLEHKSGGKSGDYNAKK
2IDE Chain:B ((9-154))
---------GRPRMVDVTEKPETFRTATAEAFVELTEEALSALEKGGVGKGDPLVVAQLAGILAAKKTADLIPLCHPLPLTGVEVRVELLKAEKRVRIEATVKTKAETGVEMEAMTACAVAALTVYDMLKAASKGLVISQVRLLHKAGGKSGEWRRE-
General information:
TITO was launched using:
RESULT:
Template:
2IDE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87067 for 1156 contacts (-75.3/contact) +
2D Compatibility (PS) -15703 + (NN) -4458 + (LL) 788
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -119740.0 ( -103.58 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2IDE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IDE-query.scw
PDB file :
Tito_Scwrl_2IDE.pdb
: