Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MLETYALKSGAVFISDAH-FLPKSPHLIHTLKELLSAKPPQVFFMGDIFHVLVGYLPLDKEQQKIIDLIHALSEISQVFYFEGNHDFSMRFVFNSKVMVFERQNQPALFQYDNKRFLLAHGDLFITKAYEF-YITQ-LTSTWARFFLTFLNLLSFKTLYPFLKKRIYQKPVRL-WELEPKELKAFIEKRLKAYQNYIKDLN-IDSIDGIIEGHFHLKSGTKIHSSVPIYCPLPSFY-YEQSLFKVSSSLLEPSQNKDA |
2QJC Chain:A ((8-249)) | YANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVS--FKQGSDTLVAVGD----LVNKGP---DSFGVVRLLKRLG----AYSVLGNHDAKLLKLVKKL----SLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRP-------------------VDRQYEDEVTTMRNLIEKVTLTATEETNDGGKPW---ASMWRGPETVVFGHDARRGLQEQYKPLAIGLDSRCVYGGRLSAAVFPGGCIISVPGWNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111366 for 1758 contacts (-63.3/contact) +
2D Compatibility (PS) -21902 + (NN) -1822 + (LL) 4160
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -138380.0 ( -78.71 by residue)
QMean score : 0.262
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