Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRHFETTRRIVIKVGTSSLVQTSGKINLSKIDHLAFVISSLMNRGMEVILVSSGAMG--FGLDILKMDKRP------QEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQIL------LT-------RDVVVFPESLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNG-QMILMNGANPRDILK-VLDGHNIGTYFAQGK |
| 2V5H Chain:A ((46-311)) | ----QFAGRTVVVKYGGAAMKQEE------LKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEGIGFVGEVNSVNS-EVIEPLLERGYIPVIS---SVAADEN-GQSFNINADTVAGEIAAALNAEKLILLTDTRGILE-DPKR-P-ESLIPRLNIPQ--SRELI---AQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154708 for 2036 contacts (-76.0/contact) +
2D Compatibility (PS) -25793 + (NN) -3762 + (LL) 296
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -193767.0 ( -95.17 by residue)
QMean score : 0.431
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