Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MIDMIKRWIEKIKSSAIAKPFVVTKKWFQDNVIKRKLVVF----SVLFVAWISLLLGAIYSPQRQTYTDEQLKTKQAFENGTGEMRLSSQTYSPETGIIIL---QFETKDSTSPVDRGIDTKRLKWNLYAKKKTSQTTMEIIPIV-DNKISII------IRNVPEDFGAYAIDITNKTISSS----SIDI--DVSNPSEEQEKPSKTKDNNTDNVIQFYVTTQSSQLKTGSLKKVSREEFALSEINEEKDFQTGQIKKLSRSIKQ----LKTSIEDDESRKSGLLKEAEYLSGEDLESNQKDIATIESNIETKNRSIETATQNIEKVQAKIASLEKKATAIKDGTFEFSNPIETVEMK- |
| 4CZX Chain:A ((1-324)) | PHMMDS-RDW---TQLGCVAYPSPIHPDYHAGPA---STIAFDNQDELLWIGTQKGFAGSFIGRELKRFTAFRIHPETD-----GPLR---QFLFVDKGVIFLGSRSVYMAARSGVPIWSIRHESMQ-DLRAMSFTSKGTSEILVAGWQNKMLVIDVNKGEVVKELPTQDQYSFLKMSRYICAATNKGTVNILDPITFTIKKQWQAHGAFINDLDTSNDFIVTCGGSHRQTHNTPAILDPYVKVFDLKNMSAMNPVPFAPLAAHVRMHPRMLTTAIVVNQA---GQIHVTDLLNPSN---SQVCYTQPQGVVLHFDVS---------------RTGEGKALADNKHNTYVWGSPNKIQFTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 83133 for 2450 contacts (33.9/contact) +
2D Compatibility (PS) -30464 + (NN) 4122 + (LL) 3336
1D Compatibility (HY) -12000 + (ID) 2450
Total energy: 45677.0 ( 18.64 by residue)
QMean score : 0.037
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